rs585705617 SNP Detail

Summary

• ID
  rs585705617
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:22325930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGA CTTCTGTATT TCAAATAAGG
  S
  TGAGGTATAG TACACTAAGA GGCAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	LP/J	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	SJL/J	SPRET/EiJ
ss921205930	MGP_WTSI_12_22275929	EVA_MGPV3	EVA_MGPV3	f	SNP	G	C	G	G	G	G	G	G	G	C	G	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	LP/J	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	SJL/J	SPRET/EiJ
rs585705617					SNP	G	C	G	G	G	G	G	G	G	C	G	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921205930	MGP_WTSI_12_22275929	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:22325930 () rs orientation: forward

Symbol	Name	Function Class
Gm10476	predicted gene 10476	within coordinates
Gm20486	predicted gene 20486	1417 bp upstream
Rr463763	regulatory region 463763	1092 bp distal