rs586231385 SNP Detail

Summary

• ID
  rs586231385
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107901410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAT CTCCCGGCGC CTCCCCCGCC
  A
  CCCCCCCCCC CACACACACA CCGCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BUB/BnJ	C57BL/6J	CZECHII/EiJ	I/LnJ	NZW/LacJ	PWK/PhJ	RF/J	ZALENDE/EiJ
ss921555298	MGP_WTSI_12_107935151	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	BUB/BnJ	C57BL/6J	CZECHII/EiJ	I/LnJ	NZW/LacJ	PWK/PhJ	RF/J	ZALENDE/EiJ
rs586231385					SNP	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921555298	MGP_WTSI_12_107935151	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107901410 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	1641 bp upstream
Rr472389	regulatory region 472389	within coordinates