rs586371745 SNP Detail

Summary

• ID
  rs586371745
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:14463678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCC TAACCCTAGC CCTAGCCGTA
  C
  CCCTAACCCT AACCCTAGCC CTAGC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57L/J	CBA/J	CE/J	DBA/2J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	QSi3/Ianm	RIIIS/J	SM/J	WSB/EiJ
ss922141116	MGP_WTSI_14_8006095	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57L/J	CBA/J	CE/J	DBA/2J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	QSi3/Ianm	RIIIS/J	SM/J	WSB/EiJ
rs586371745					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss922141116	MGP_WTSI_14_8006095	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14463678 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Abhd6	abhydrolase domain containing 6			Intron
				mRNA-UTR
Rr487897	regulatory region 487897			1065 bp distal
Rr487898	regulatory region 487898			within coordinates
Rr487899	regulatory region 487899			1805 bp proximal
Tssr124225	transcription start site region 124225			437 bp upstream
Tssr124226	transcription start site region 124226			495 bp upstream