TCCCT TCCTCCCTCC CTCCCTCCCT C CCTCCCTTCC TTCCTTCCTT TCTTC C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
C3H/HeJ |
C57BL/6J |
C57BL/10J |
C57BL/10SnJ |
CAST/EiJ |
CBA/J |
CZECHII/EiJ |
FVB/NJ |
I/LnJ |
KK/HlJ |
MOLF/EiJ |
NON/ShiLtJ |
NZO/HlLtJ |
PWK/PhJ |
RF/J |
RIIIS/J |
WSB/EiJ |
ZALENDE/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss918609746 | MGP_WTSI_7_26939741 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
SNP Consensus Information | |||||||||||||||||||||||||||
SNP | Consensus Type | AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
C3H/HeJ |
C57BL/6J |
C57BL/10J |
C57BL/10SnJ |
CAST/EiJ |
CBA/J |
CZECHII/EiJ |
FVB/NJ |
I/LnJ |
KK/HlJ |
MOLF/EiJ |
NON/ShiLtJ |
NZO/HlLtJ |
PWK/PhJ |
RF/J |
RIIIS/J |
WSB/EiJ |
ZALENDE/EiJ |
||||
rs586448454 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss918609746 | MGP_WTSI_7_26939741 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
Location: Chr7:26639166 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cyp2a22 | cytochrome P450, family 2, subfamily a, polypeptide 22 | 328 bp upstream | ||||||
Rr155590 | regulatory region 155590 | 1835 bp proximal | ||||||
Rr164580 | regulatory region 164580 | 75 bp distal | ||||||
Rr164581 | regulatory region 164581 | 1953 bp proximal | ||||||
Tssr71335 | transcription start site region 71335 | 351 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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