rs586481656 SNP Detail

Summary

• ID
  rs586481656
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152493348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT GTGTCTGTGT GTCTGTGTGT
  S
  TGTGTGTGTC TGTGTGTGTC TGTGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi5/Ianm	RF/J	ST/bJ	SWR/J	WSB/EiJ
ss915763218	MGP_WTSI_2_152651428	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	C	C	G	G	G	G	C	C	C	C	C	C	C	G	G	G	G	C	C	C	G	G	C	C	G	C	G	C	G	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi5/Ianm	RF/J	ST/bJ	SWR/J	WSB/EiJ
rs586481656					SNP	G	G	C	C	G	G	G	G	C	C	C	C	C	C	C	G	G	G	G	C	C	C	G	G	C	C	G	C	G	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss915763218	MGP_WTSI_2_152651428	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152493348 () rs orientation: forward

Symbol	Name	Function Class
1700030C14Rik	RIKEN cDNA 1700030C14 gene	1455 bp downstream
D2Ertd691e	DNA segment, Chr 2, ERATO Doi 691, expressed	312 bp distal
Rr374088	regulatory region 374088	669 bp upstream
Rr567410	regulatory region 567410	1424 bp proximal