rs586637138 SNP Detail

Summary

• ID
  rs586637138
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57254544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGTT TTTTTTTTGG GGGGGGGGGG
  T
  GGGGGGTTGT TGTTGTTTTG TTTTA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J
ss916128069	MGP_WTSI_3_57347123	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J
rs586637138					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916128069	MGP_WTSI_3_57347123	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57254544 () rs orientation: forward

Symbol	Name	Function Class
Gm56807	predicted gene, 56807	within coordinates
Rr577089	regulatory region 577089	1977 bp distal