rs587091381 SNP Detail

Summary

• ID
  rs587091381
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:143830268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACATACACA CACACACACA
  T
  ACACACACAC ACACACACAC ACACA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BALB/cByJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C58/J	DBA/1J	I/LnJ	LEWES/EiJ	LG/J	MA/MyJ	MOLF/EiJ	NZB/BlNJ	NZW/LacJ	RF/J	SM/J	ST/bJ
ss917756584	MGP_WTSI_5_143893450	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BALB/cByJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C58/J	DBA/1J	I/LnJ	LEWES/EiJ	LG/J	MA/MyJ	MOLF/EiJ	NZB/BlNJ	NZW/LacJ	RF/J	SM/J	ST/bJ
rs587091381					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917756584	MGP_WTSI_5_143893450	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:143830268 () rs orientation: forward

Symbol	Name	Function Class
Ankrd61	ankyrin repeat domain 61	within coordinates
Eif2ak1	eukaryotic translation initiation factor 2 alpha kinase 1	within coordinates
Rr624304	regulatory region 624304	987 bp distal
Tssr54383	transcription start site region 54383	1536 bp downstream
Tssr54384	transcription start site region 54384	1575 bp downstream
Tssr54385	transcription start site region 54385	1628 bp downstream