rs587261134 SNP Detail

Summary

• ID
  rs587261134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89620366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCC ACTTATCAGT GAATACATAT
  Y
  GTGTGAGTTT CTTTGTGAAT GTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	I/LnJ	KK/HlJ	LEWES/EiJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZW/LacJ	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SM/J	SWR/J
ss920529450	MGP_WTSI_10_89784504	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	C	C	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	C	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	I/LnJ	KK/HlJ	LEWES/EiJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZW/LacJ	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SM/J	SWR/J
rs587261134					SNP	T	T	T	C	C	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	C	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss920529450	MGP_WTSI_10_89784504	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89620366 () rs orientation: forward

Symbol	Name	Function Class
Bltp3b	bridge-like lipid transfer protein family member 3B	within coordinates
Tssr95182	transcription start site region 95182	1333 bp upstream