rs587481623 SNP Detail

Summary

• ID
  rs587481623
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72214322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TGGGTTTTTT TTTTTTTTTT
  C
  TTTTTCTTTT TTGGTTTTTC GAGAC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S5/SvEvBrd	BALB/cByJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	CE/J	CZECHII/EiJ	LEWES/EiJ	MA/MyJ	PWK/PhJ	RIIIS/J	SWR/J	ZALENDE/EiJ
ss919885072	MGP_WTSI_9_72307040	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S5/SvEvBrd	BALB/cByJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57L/J	CE/J	CZECHII/EiJ	LEWES/EiJ	MA/MyJ	PWK/PhJ	RIIIS/J	SWR/J	ZALENDE/EiJ
rs587481623					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss919885072	MGP_WTSI_9_72307040	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72214322 () rs orientation: forward

Symbol	Name	Function Class
Tssr85977	transcription start site region 85977	1164 bp downstream
Tssr85978	transcription start site region 85978	361 bp downstream
Zfp280d	zinc finger protein 280D	within coordinates