rs587495665 SNP Detail

Summary

• ID
  rs587495665
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGAAA TGCACACTGT AGGACCTGGA
  K
  TATGGCAAGA AAACTGAAAA TCACA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	CZECHII/EiJ
ss922192280	MGP_WTSI_14_19419474	EVA_MGPV3	EVA_MGPV3	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	CZECHII/EiJ
rs587495665					SNP	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss922192280	MGP_WTSI_14_19419474	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050231 () rs orientation: forward

Symbol	Name	Function Class
Tssr4286	transcription start site region 4286	1966 bp downstream
Tssr4287	transcription start site region 4287	1931 bp upstream
Tssr4288	transcription start site region 4288	1903 bp downstream
Tssr4289	transcription start site region 4289	1808 bp upstream
Tssr4290	transcription start site region 4290	1801 bp downstream
Tssr4291	transcription start site region 4291	1721 bp upstream
Tssr4292	transcription start site region 4292	1685 bp downstream
Tssr4293	transcription start site region 4293	1650 bp upstream
Tssr4294	transcription start site region 4294	1648 bp downstream
Tssr4295	transcription start site region 4295	1575 bp upstream
Tssr4296	transcription start site region 4296	1612 bp downstream
Tssr4297	transcription start site region 4297	1548 bp upstream
Tssr4298	transcription start site region 4298	1530 bp downstream
Tssr4299	transcription start site region 4299	1490 bp downstream
Tssr4300	transcription start site region 4300	1452 bp downstream
Tssr4301	transcription start site region 4301	1434 bp upstream
Tssr4302	transcription start site region 4302	1422 bp upstream
Tssr4303	transcription start site region 4303	1367 bp downstream
Tssr4304	transcription start site region 4304	1338 bp upstream
Tssr4305	transcription start site region 4305	1269 bp downstream
Tssr4306	transcription start site region 4306	1250 bp upstream
Tssr4307	transcription start site region 4307	1229 bp downstream
Tssr4308	transcription start site region 4308	1197 bp upstream
Tssr4309	transcription start site region 4309	1153 bp upstream
Tssr4310	transcription start site region 4310	1106 bp downstream
Tssr4311	transcription start site region 4311	1078 bp upstream
Tssr4312	transcription start site region 4312	998 bp downstream
Tssr4313	transcription start site region 4313	939 bp upstream
Tssr4314	transcription start site region 4314	927 bp downstream
Tssr4315	transcription start site region 4315	903 bp downstream
Tssr4316	transcription start site region 4316	876 bp upstream
Tssr4317	transcription start site region 4317	800 bp downstream
Tssr4318	transcription start site region 4318	776 bp upstream
Tssr4319	transcription start site region 4319	719 bp upstream
Tssr4320	transcription start site region 4320	655 bp downstream
Tssr4321	transcription start site region 4321	627 bp upstream
Tssr4322	transcription start site region 4322	528 bp downstream
Tssr4323	transcription start site region 4323	493 bp upstream
Tssr4324	transcription start site region 4324	463 bp downstream
Tssr4325	transcription start site region 4325	412 bp downstream
Tssr4326	transcription start site region 4326	374 bp upstream
Tssr4327	transcription start site region 4327	371 bp downstream
Tssr4328	transcription start site region 4328	289 bp downstream
Tssr4329	transcription start site region 4329	291 bp upstream
Tssr4330	transcription start site region 4330	157 bp downstream
Tssr4331	transcription start site region 4331	125 bp upstream
Tssr4332	transcription start site region 4332	39 bp upstream
Tssr4333	transcription start site region 4333	20 bp downstream
Tssr4334	transcription start site region 4334	within coordinates
Tssr4335	transcription start site region 4335	123 bp downstream
Tssr4336	transcription start site region 4336	127 bp upstream
Tssr4337	transcription start site region 4337	200 bp downstream