rs6153397 SNP Detail

Summary

• ID
  rs6153397
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:159813743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         GTAATTGTTT
  CTTCCTTAAA GGGGAAAGAA ACCATGTATT TCCTTGGTTA AGGTCAGATT TGTTTTGCAT
  TTGTCTTACT TTGCTGATAC AGAAGAATTC TGTTTTCATA TAGCCACCAA CCTTGCAAAA
  GGTATAAGNC aagctgagtg agattgcaaa ggcctataaa tcccaacact gggaaggcag
  agtcagaagg atcaggagtt caagaccagc ctaggacaaa caaacaaaca aacaaacaaa
  Y
  gcaaaaacag tccccaccaa agaaaaCCCA ATggaactgg agagatagct ccaccatcaa
  gagtgcttgc tggtcttcca gaggatctga gttttattcc taggacccac attggatggc
  ctacaactgc ttataactcc agttccatgg gatttgatgc ctccaagggt accacactca
  tgtgttcttt ctgtctctat ctctcctttc ctctctctct ctttcatata cacatacaaa
  attaaaaaaT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8558890	WI_WGS_X_138131523	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6153397					SNP	C	T