rs6154661 SNP Detail

Summary

• ID
  rs6154661
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:22818337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAGTCTAG TCAGTTTCCA
  AAAGCACAGA TGCACACCCA TATGTAAGTA TATTATTAAG GATACAAGAG GACATTTTAA
  AGCAAAACCT TGTAGCATGT GATGGCTGCT CTTTGACTTC CTGTGTTGTT TTAATGTGTT
  AGTTCTTTGG TGAACACCAT GTTTGTGTTC CTCCTTCCAC TCTGTAGGAA GTGTGCTAGT
  R
  GTGGCCATGA TGACACAGTA CTCTCACATG TCATATTTCG TAGAAATGCT ATCAGCTTTC
  AGCTGCTCAT GCTCGATCTA GACATTGTTT TCAATTTTCC ACGCCACTTT TATTTTCTAT
  GCAAGTTTTC TAGTATTTTG TAGTCAAATC TATTAATTGA TTTTTTAAAA AATTGACGTC
  TGCCTTTAAT ATGAAGTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8560158	WI_WGS_9_22985052	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6154661					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:22818337 () rs orientation: forward

Symbol	Name	Function Class
Rr383073	regulatory region 383073	within coordinates