rs6155040 SNP Detail

Summary

• ID
  rs6155040
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182095858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CAggctggga
  gtatagcttg gtttgtagtg tgtatagcta atgtatagga agctctgaga cggttcccca
  gcagagcata aaatcagcag tggtggcaca tgcctgtcat agtaggtctc cagaggtaga
  ggcgagaaca caaggttgtc cttgactagg ttgctagacc aaagccagct tgctatgtga
  gctctgtctT TAGTCAGTTT TATAAAATGC CAACTGAGGA AAACATGAAG CGAAGAAAAT
  R
  TGTACGCCAC TGTAAGACTC TTTCAGTGTC CCAGGAACTG CAGTGGATNG AGCCCNCACT
  GGCCNGACTT TGTTTGTTAG TCCCCCATCC CTAGTTAATC CGNAACCTGG TTGCCATGGG
  TGAAAGCGAA AGTCACACAG TTGCTTAGGG AAAGCTTCCT CCAAAAGTTG ACCTCTGAAC
  TGAGAGCTGG GGTAGGAGAG GACTTGGTTG TACTGGACTT GGTCCAGGGT CCGTACAGAA
  GGAGCTGAGG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8560537	WI_WGS_1_183664304	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6155040					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182095858 () rs orientation: forward

Symbol	Name	Function Class
Rr424897	regulatory region 424897	within coordinates