rs6160185 SNP Detail

Summary

• ID
  rs6160185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98156146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGAAAAGGA GTGGGGCTGG GGGAGGAATT GGCGCGGTTT
  CACATGATTG GTCCATTTAA ACATCAGCAG CCTGTAACAT TTAACTTAGG TCAGAGGGGT
  R
  GGAGATAGGG AGGCGATGGG CCTGCCCGGG CATGTCCTGG TCTGTTCTGC TATGTTCTCA
  GCCCCAGGTT TCAAAGCTCA CAAACAACTC TTTGGGCTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss8565701	WI_WGS_15_99168377	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs6160185					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98156146 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7649	CpG island 7649	1082 bp distal
H1f7	H1.7 linker histone	972 bp upstream
Rr311340	regulatory region 311340	1382 bp distal
Rr391174	regulatory region 391174	within coordinates
Tssr136230	transcription start site region 136230	953 bp upstream
Tssr136231	transcription start site region 136231	833 bp upstream