rs6161503 SNP Detail

Summary

• ID
  rs6161503
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:68736095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCCCCTG GCCCAAGGCT
  TTCTGTCCTA AGAGAAACTC CAGAGTCACC ACTCACTTCA GGAGCTTGGA TAGAGCAGGG
  TTAGAGGGCC GAGGAGCTGG CTCAGTGAGT TAAAGAATTG GCTGTTCGTG CATAAGGAAC
  CTTGAGATCA AATTGCCAGC ACCCAAAGAA GCCAGGAATG GGTGCAGAGT CAGGAGGATT
  K
  CTGGGATTTG CAGGCTATCA GTCTGGCTAC AGATTGAATA AGAGACCCTG TCACAAAGGA
  GTGTGGTAGA GAGTGAGTGC TGGGGAGGCG GAGGTAGGAA GGATACCTGA TGCCCTCCTC
  TGACTTCTGT GTAACACACA CACACACACA CACACACACA CACACACACG TTAGTGTTAC
  TCCTACAGTC TCCATGATAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8567022	WI_WGS_9_69424802	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6161503					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:68736095 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr8	DNA segment, Chr 9, Derry C. Roopenian 8	103 bp proximal
D9Mit260	DNA segment, Chr 9, Massachusetts Institute of Technology 260	111 bp proximal
Rora	RAR-related orphan receptor alpha	within coordinates
Rr383535	regulatory region 383535	within coordinates