rs6163423 SNP Detail

Summary

• ID
  rs6163423
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:26140283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGTCTG GAACTTCGAG
  ATGCCCACCT CCACCTTATG AGTGCTGAGC ACTGCATGTG TCACCACACC CAGCCCTTAT
  AATAACTTAA TAAAAATATA TTAGTGTGAG TGCATGTGTG TGTGTTGTGT GTTGTGTGTG
  TGTGCATGTG AGTGTGTATT TACATTTGTA TATGCTGGTG CCGTGGAGGC CAGAGGAAGG
  Y
  ATTAGATCCT CAGAAGTTGG AATTACAGGT GACTTTGAGC TGCTTGACAT GGGTGCTAGG
  AATCAAATTT GTGTCCTCTT GAAGAGTAGT AACAAGCCAT CTCTCCAACC CTCAATAACT
  GTTTTCCCCA AAACTAGGAG TTGAAATGAG GGTTTTGCAC ACAGTAGGTG AGCATTCTCC
  GACCAAGTTT TGATAACCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8568945	WI_WGS_8_24380333	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6163423					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:26140283 () rs orientation: forward

Symbol	Name	Function Class
Nsd3	nuclear receptor binding SET domain protein 3	within coordinates
Tssr76701	transcription start site region 76701	852 bp downstream