rs6166450 SNP Detail

Summary

• ID
  rs6166450
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:89269720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGGCCAC CCTAGCAGCC
  CTGGGAAAGA AAAGAAAGGA GCCAGCCAAG CCAGAAACTT TCTCCCCAGG ACACCGCAAA
  GCAAAGGATA TTCCTGTCCC CATCATGATC CACTTTACCC CTCGAAGTCT CGACAGCAAA
  ATAGAGATGC AGCTGGAGGC ATCTGGAACC TATGGTAAGG GGACAGCTGG GCTAGGCCCT
  R
  TCCATACGGA GCAACAGGAC ACCACCAGCC CCTGGCACCT GCCTGTGGGG CCTCTTGGCC
  CTCTGGGGAG AGGCCTAGGC AGCTTGCGCC GGCGCCGGCG GCCTGGTGCC AGCTCAGGAG
  ACAGACCCTG CCGTCCTCTA AAGCTGGATC CTCTCCGCCT GGGCACCGTG GTGAGTGTGT
  GGGATGCTGT GGACATGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8571984	WI_WGS_15_90227987	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6166450					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:89269720 () rs orientation: forward

Symbol	Name	Function Class
Gm62017	predicted gene, 62017	within coordinates
Klhdc7b	kelch domain containing 7B	within coordinates
Tssr4689	transcription start site region 4689	650 bp downstream
Tssr132668	transcription start site region 132668	633 bp downstream
Tssr132669	transcription start site region 132669	618 bp downstream
Tssr132670	transcription start site region 132670	607 bp downstream