rs6167183 SNP Detail

Summary

• ID
  rs6167183
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:30239791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTTTGTTGGT TAGGGTAACC TTGCATACAC ACCCATACAT ACACATCATG
  TAAGTTGTCA GTTGCCTGTG TTTTCTTTCA TCCATGTCTA CAGCCCTCAT GGCTATACTT
  GGTAAAACCA AACATGGCAC AACAATGAAA TGCATTGGCT CAAACAAATC TATTCCAGGA
  M
  TTTAAAAAAT TATTTATTTA TTTATTTATT TATTTATTTA ATATCTTGAT CACAGCTTCC
  CCTCCCTCCT CTCCCCCAAG TCCCTCTCAC CTCCCCTCCC CCATATATCT CAGGACTTTA
  AAGAAAGTTA TTTATTAGAT GATTATAAAG TAAGGGGATT TAAAAGAACA TCAAAAATGA
  TACAGCGTAT CTCTTTTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss8572717	WI_WGS_15_30317660	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs6167183					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:30239791 () rs orientation: forward

Symbol	Name	Function Class
Ctnnd2	catenin delta 2	Intron
D15Mit249	DNA Segment, Chr 15, Massachusetts Institute of Technology-249	22 bp distal