rs6167184 SNP Detail

Summary

• ID
  rs6167184
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83302136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTGCCAG GCACTGGGCT
  TTCCGTGGAC AACCTCACAA TACCTATGAA GTTTCTTGGC CAAGGTCATC CTTTAAATTA
  TTTAAATAAA TGGCAGAGCT GGGAGTCTAA CCTTGATGGT TCTTGCTCCA AACCCTGCCC
  TTTATTTACC ATTGTGCACA TATACATACA TAATCGTAGG TTGAGTGTTG TGAACCAGGA
  M
  AGCCTGGGGG GAGGCATTCA CCTATGATCC ATGCATATAT AAAAACACAC ACATGAAAAC
  ATGATATGAT GGAAACCATC AGAGCCCAGG AAACCACCTC TCTGCACCCA CTTACTATGG
  GGGGGTTCAT CATTCAGCCC AGGTTTTCTC CTTCCAGCGA AGAGGTTTAC TGAGGCTGTC
  TTGGGGGCTA TTGGCTTTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8572718	WI_WGS_11_84062057	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6167184					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83302136 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3411	CpG island 3411	952 bp distal
D11Bhm144	DNA segment, Chr 11, Boehm 144	360 bp proximal
Gm72478	predicted gene, 72478	674 bp upstream
Rasl10b	RAS-like, family 10, member B	within coordinates
Rr452948	regulatory region 452948	1228 bp distal
Rr452949	regulatory region 452949	1093 bp distal
Rr452950	regulatory region 452950	657 bp distal
Tssr103693	transcription start site region 103693	1592 bp downstream
Tssr103694	transcription start site region 103694	1583 bp downstream
Tssr103695	transcription start site region 103695	1561 bp downstream