rs6167745 SNP Detail

Summary

• ID
  rs6167745
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:76938644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAATTTCT ACATGTGAGC
  CAGGGTATAG GCACACATGC ACACACACAC ACATACACAC ACACACACAC ACACAGAGAG
  AGAGAGAGAG AGAGAGAGAG AGAGAAAGAC AAAGAGAGAC AGAAAGACAG ACAGACAGAG
  ACACACACAA ATATTTAAAA ACTTGAGAGA CTGGTGAATT AATTTAAGAA ACTATAATCC
  Y
  ATGTTCTCTA TGTGAAACAT TGTCTATCCA AACAGGCTGA CATGGGAAAG ACAGCCTATG
  CAGAGAGGAT GCTGGATAGG TATAATATTA GAACAGATTT TAAAAGATTT ATTTATTTAT
  TTTATGTATA TGAGTACACT GTTGCTGTCT TCAGACACAC CAGAAGAGAG CATCAGATCC
  CATTACAGAT GGTTGTAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8573281	WI_WGS_10_77542680	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6167745					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:76938644 () rs orientation: forward

Symbol	Name	Function Class
Col18a1	collagen, type XVIII, alpha 1	within coordinates