rs6168144 SNP Detail

Summary

• ID
  rs6168144
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102357067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAATAAT AAAAATGTGT
  TTCCCAAGGT CATGTATCCA CGACTACTAA TTCACTAATT TAAAATAATT TCATCATCTC
  TCCAAAAAAA AACCTGTGCA TATAAAGTCA CACCCTCATT TCTCTAGCCC CAGGCACTAA
  TCTAACACTA TCTCTTTGAC TTGGCTCATC TTAAACATTT TCTACCAGTG GGATCGTGCG
  R
  TGTATTTTGT GGCTGGATTC TTTCCACTCA AGACAGTGTT TGCAATGTTC ATGCATCTTG
  CCGTACCGGG GCCCTGTTCC ATGTTCTACC AGAGTAAGAA TCCATTGTAT GGTGATGCTC
  AGTTGTGTTT ACTTCTAAAT TTGCAGGCAT CCCCCCAATG GCTCTGCCCT TTTCCATTTC
  CACCTCCATG TGTAGGCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8573680	WI_WGS_9_103215024	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6168144					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102357067 () rs orientation: forward

Symbol	Name	Function Class
Gm68206	predicted gene, 68206	within coordinates
Rr685715	regulatory region 685715	584 bp distal
Rr685716	regulatory region 685716	655 bp distal