rs6168729 SNP Detail

Summary

• ID
  rs6168729
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102357158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGTGCAT ATAAAGTCAC
  ACCCTCATTT CTCTAGCCCC AGGCACTAAT CTAACACTAT CTCTTTGACT TGGCTCATCT
  TAAACATTTT CTACCAGTGG GATCGTGCGG TGTATTTTGT GGCTGGATTC TTTCCACTCA
  AGACAGTGTT TGCAATGTTC ATGCATCTTG CCGTACCGGG GCCCTGTTCC ATGTTCTACC
  R
  GAGTAAGAAT CCATTGTATG GTGATGCTCA GTTGTGTTTA CTTCTAAATT TGCAGGCATC
  CCCCCAATGG CTCTGCCCTT TTCCATTTCC ACCTCCATGT GTAGGCTTCC AGTTTCTTCA
  CATCCTTGAG AGAGTTTGTT ATTGCGTGCT TTAATTACAC ACAATTGCAG GTTGGGCTTG
  CATTCCTCTA ATGACCAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8574266	WI_WGS_9_103215115	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6168729					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102357158 () rs orientation: forward

Symbol	Name	Function Class
Gm68206	predicted gene, 68206	within coordinates
Rr192160	regulatory region 192160	558 bp distal
Rr202365	regulatory region 202365	1931 bp distal
Rr202366	regulatory region 202366	526 bp distal