rs6169382 SNP Detail

Summary

• ID
  rs6169382
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:96203639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATGTATA AACATGGGGA
  TCTGTGTTTT ATCCCAAAAA TTCATTTAAA AAATCCAGGT ATGGTGGCAT AGACTTCTAA
  CCCCAGATTT CTCAGGAGGC AGAGAGGGTC AGATTGCTAT GCCTCATTGG CTAGACAGTC
  TTGTCTATTT GTTGAGTTCC AGGCCATTGA AAGACCTTGT CTCAAAAAGT CAATGGAGCT
  Y
  AAGAAATAAC CATTTGATCT TTACTATTCT TGTAAATCAC TGCATTGTTA TCATCACACT
  TACTTTCTTG ATATGGCAAA TAAGTGACAG TGATTTTATG CTTCACACAT AAGCGCTTAA
  CACAGTTTGA ACAAAACATT TTATGACATG AAAAATACCA CCTAAATTTT TTGTATAATT
  CATAGAAATA AAAAGATGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8574921	WI_WGS_4_94056979	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6169382					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:96203639 () rs orientation: forward

Symbol	Name	Function Class
Cyp2j11	cytochrome P450, family 2, subfamily j, polypeptide 11	within coordinates
Rr376878	regulatory region 376878	360 bp downstream