rs6174623 SNP Detail

Summary

• ID
  rs6174623
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127544738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTTCCCTA AATGGGCTCA CACAGAGCTA CCCATCATGC
  AGTGCATTTG TAGTAGCCAG CCCTACTATG TGATGTGGCT AGAATGGGTC TAGACTGGGT
  K
  GTGGGGAGAT CCAGTTTCCT CAGCAGACCT GCTTTCCTTA TAGCCAGCTC TCCAGGGCCA
  AGCCAGATGC TGGGAGTACC TGGGGATATA TATAGTGCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8580173	WI_WGS_2_128683599	WI	MOUSE	f	SNP			T	G
ss147538534	ENSMUSSNP6372095	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6174623					SNP	T	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127544738 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	209 bp distal
Gm10765	predicted gene 10765	within coordinates
Mall	mal, T cell differentiation protein-like	1572 bp downstream
Tssr20034	transcription start site region 20034	397 bp downstream