rs6176967 SNP Detail

Summary

• ID
  rs6176967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57803817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AGTTTTTCNA
  TTCAAGTACA TCTTAGCCCT AAAAACTGAG CATAGCAAGG CTGTGGTTTC CACCTTTCCA
  TGAAGTCCTG AATCCTGCTT GGCCTTAGGC CTCCCCTCCT ATCTCTGCTC AACCATGGGA
  GGATAGCTCA AACATCCAGA GGCTCCTCTG TTAAGGGAAC TGCTACNGGT CACTCCTGCC
  CAATAGTTTG AATGTTGTCC ATGAacacac acacacacac acacacacac acacacacac
  R
  cGCCTGCATC ATTTTTCTTG CACTAGGTGT GTTCTCAACA TTTAGTGACA GTCTCTGCAG
  CTCCTAGCCC TAAGCTCACA GCGGCACCTC CTCTCCCTAG GAAACGTGCT GCTGTAGAGG
  TCCTCATCTT CCTGCAGCCC TGCCCTGGAA CGCTGTGGTA TGTCCCTGCC CCGGGAAAAC
  TGTGACCCTC AAACCACTTT CCTGCCCAGC AGGGTGGGAT GTCACTATGA TGAGTCAGCT
  CATGCCCGAG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8582529	WI_WGS_11_58423293	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6176967					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57803817 () rs orientation: forward

Symbol	Name	Function Class
D11Mit143	DNA segment, Chr 11, Massachusetts Institute of Technology 143	1746 bp proximal
Gm33078	predicted gene, 33078	within coordinates
Gm73794	predicted gene, 73794	1391 bp downstream
Rr234828	regulatory region 234828	184 bp proximal
Rr244432	regulatory region 244432	1045 bp distal
Rr244433	regulatory region 244433	708 bp distal
Rr250602	regulatory region 250602	within coordinates