rs6177921 SNP Detail

Summary

• ID
  rs6177921
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:69421402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGACAATTG GCAGAGGTGC
  TTTTGGCTGT CACAGTTAGG GGATTCCACA GTCCCTAGTG GGTGGAGGCC AAGAGCACTG
  ACAAACATTT TACAATAGAC AGGACAGTGT CACACAAAAA ATAATTATCT GTCCCTAAAT
  GGTGCAAGAT CAAGGAACTC TGAAATAGAT CAACTCTTTA AGAATTTGAT GGTGGGGGTG
  S
  GGGAGATGGG ATGGGGGTTT CCGAAGGGAG ACCCAGAAAG GGGAAAACAT TTGAAATGTA
  AATAAAGAAA ATATCCAATT AAAAAAGAGA GAGAGAGAAT TTGACTGTGT GTTGGAAGTG
  CTCCCTGTAA TCCCAACACC AAAGGGACTA AGGTAGGAGG GTTGCTATGA GTTTGAGGTA
  AGCTTGGGCT AACCTCAAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8583484	WI_WGS_2_70367226	WI	MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6177921					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69421402 () rs orientation: forward

Symbol	Name	Function Class
Rr373310	regulatory region 373310	within coordinates
Rr558431	regulatory region 558431	192 bp distal
Rr558432	regulatory region 558432	1015 bp proximal