rs6181130 SNP Detail

Summary

• ID
  rs6181130
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63642245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCAAGTTGCT
  TGCCAGAAAG GCTGTGACAA GTCTCTTCAG CCTCCTGTGA GGCAGCATGG CCTCTACCAT
  CCACGGCAAT CCCAGAGAGA GACGGCTTGG TTCTTCCCCA TGAGGATCAC ATCATCCCTC
  CACAAATGCT TTCCAGAGCT GGGATGCAGG CGAGTACGAG CACTGCAGAG AGCTAGCGTT
  CAGAATGCCA TGGGATGAGA GCCATGAGAA GACAGTAGCG AACAAGCCAA TCACTGAGCA
  R
  AATTCCCAGC AGAGGTGAGT GCTGTGGAGA AAGTCAGTCA ACCATACCAG AGGGGCTGGA
  CTGTTCAGAT AAAACCTCTT CCAGGGTCAG GTGAAAGTCA ACATACTTGG GTCTGAATGG
  CGGGGAAGTG TTGTGGGGCA GGGCGAGAGC AAGAGGTAAA GCCCAAGTGT GGGCTCGCCC
  AAAAGCAAAG GTAGCACACT GGAGGGCAGA GATGCATGGG CAGCAGAGGA AACAGGGCAT
  AAGCCCAGGA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8586700	WI_WGS_14_54510020	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6181130					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63642245 () rs orientation: forward

Symbol	Name	Function Class
Blk	B lymphoid kinase	within coordinates
Tssr129184	transcription start site region 129184	432 bp downstream
Tssr129185	transcription start site region 129185	455 bp downstream