rs6181149 SNP Detail

Summary

• ID
  rs6181149
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:56599708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGAAGAGG AATTCTCAAC
  AGGGGAAAAC AGACAGACAT GTTTCTTGAC TGACAGTTGA TAAGAGAAGT CAGTGTCACC
  CCTGGGCAGA CAGTCCTGAG TTGGATACAT TCTATAAACA AACCATCCAG AGCAAGCCCC
  TAAGAACGCT TCTTCATGGC CTCTGCTTTA GCTCTTACAT CTCAGGTCCC TGCCTTGAGC
  Y
  CTGCCTGACT TACAAAATGA AATAAACCAT TCCCTCGCCA AGCTGCTTTT TCTCGTGATG
  TTTTAGAACA GCAATAGAAG CCCTAAGACA AGGTCCTTGT GGGTGTTATC TCCTCTAATC
  CTGTACTAAC TCTACAAAGG GTGGACTTTC TTCATTTGTG AGAAAACAAA GGTTTTGAAT
  GATGTCATCA CTTGATTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8586719	WI_WGS_4_55497233	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6181149					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:56599708 () rs orientation: forward

Symbol	Name	Function Class
D4Mit314	DNA Segment, Chr 4, Massachusetts Institute of Technology-314	1314 bp distal