rs6183151 SNP Detail

Summary

• ID
  rs6183151
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83334880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAAACAT TGCCATCAAC
  TGTGACTTCC CAGAAGTAAC TCCCTTTGAA GACATACAGT CGCCATTGCC CATCTATCCC
  GAGATAAGAG ACATGAGGAA AGGCTACTGG CCTCCTGATG ATTTGGGGGG GGGAGGGGCT
  GCCCTAAACC CAGTTTCCCA GACAAGCGGA AGGTAGCATG CAGGGGGCGT GGAGAGGGCG
  K
  GGCTGAGGGA AGCGGGAGTT CTTTGCTGGG CCTGAGTGGT TTTAGGATTT CTATATCCTA
  GATCTCCCCA TTCCTCACAC CTTGTAATTC AGCTCTGGAC CCCTGGAGAT GTGGAGGACA
  GAAGACAGAC ACCAGGCATG GCTGGGACCA TCTTACCTAC AGTGATGGCA TCAAAGGAAG
  AGTGGCAGTA TTTAGGACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8588729	WI_WGS_11_84096097	WI	MOUSE	f	SNP			T	G
ss38812425	mCV22343076	ABI	CRAMUS_MOUSE	f	SNP	G	G	T		T
ss132469315	ENSMUSSNP1424815	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			T
ss323767178	CHEV_11_83257556	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6183151					SNP	G	G	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83334880 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3415	CpG island 3415	1056 bp distal
Cpgi3416	CpG island 3416	601 bp proximal
Mmp28	matrix metallopeptidase 28 (epilysin)	within coordinates
Rr452960	regulatory region 452960	1381 bp distal
Rr452961	regulatory region 452961	1167 bp proximal