rs6184782 SNP Detail

Summary

• ID
  rs6184782
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70847795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAGATTAC GAACCATTAT
  CTTATTCTGT TTAGGTGAAT AATAGGATCA TCAACTGACA CTACAATGAA AAATTGATTG
  GGGAACTTTT TAAGTGGCAA AATTGAGCTG ACTCCTTAGA ACTCAAAGTT TGGTAGCCAC
  ATTATCAAAA GTGGGGCAGA CAAATAATCT GCACCTTATG GCATAACACA GGGCTCTGCA
  Y
  GCTTTTTATG TAGAGGTTCA GATAGTAAAT ATGTAGGTGT CAGATACCTT GGGCATCGAA
  GGATACATGG TCTCTGTTGC TATTATAACA ATGGTTGCAA TTATAGTGAG CTCTGCAGTT
  GCTGCTCAGA AGTGCTCATG GATATATGCA AATGATAGAA TGTGTGAATG TATTATAAGA
  CTTTTTTAAA TGAAACTGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8590367	WI_WGS_6_71726253	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6184782					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70847795 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	1416 bp upstream
Rr631848	regulatory region 631848	495 bp proximal