rs6185342 SNP Detail

Summary

• ID
  rs6185342
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70847905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCCTTAGA ACTCAAAGTT
  TGGTAGCCAC ATTATCAAAA GTGGGGCAGA CAAATAATCT GCACCTTATG GCATAACACA
  GGGCTCTGCA CGCTTTTTAT GTAGAGGTTC AGATAGTAAA TATGTAGGTG TCAGATACCT
  TGGGCATCGA AGGATACATG GTCTCTGTTG CTATTATAAC AATGGTTGCA ATTATAGTGA
  R
  CTCTGCAGTT GCTGCTCAGA AGTGCTCATG GATATATGCA AATGATAGAA TGTGTGAATG
  TATTATAAGA CTTTTTTAAA TGAAACTGAT CGGGCAAAAT TTCGCCTGTG CAGTTCACAG
  TCTCCTAACA CAATAGGAAG TAGTACCAGA TCTGAGGCAC ACAGTCCAGG ACATGCATGG
  GTTAAAAGAA GTTGTTAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8590927	WI_WGS_6_71726363	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6185342					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70847905 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	1306 bp upstream
Rr631848	regulatory region 631848	385 bp proximal