rs6185520 SNP Detail

Summary

• ID
  rs6185520
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57561724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTTTAAC CTCTTCCTGA
  TGGTTTTGCC ATGGGTAAAT TGTAAATAAT AACAGTACCT ATACACATGG GCTGGAGAGA
  TGGCTTAGCA GCTAGATTTG CAGCTTTTCC AGAAGACGTG AGTTCGAGTC CTAGCACCTG
  TGTCAGGTGG CTCGTAACTG ACTGCAACTT CAGCTCTAGG AGATTTAGCA CTCTTTTCTG
  R
  CCTCTAAAAG CAGTTGCTCA CATATGACAT ATACATATGC ACACACAAAT AAAAATAAGT
  CTTCTCTTAA AAAAATAATG ATACCTACAT GAAAGACTAT GAGAAGTCTT AACTATGTAG
  TGCCTAGTCT GTTGCTTTTG GGTCAAACAG GCACAATAAG TGTTTGTTGT TACCGTTGTT
  AACTCATAAT GAAAGCAATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8591105	WI_WGS_8_56254078	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6185520					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57561724 () rs orientation: forward

Symbol	Name	Function Class
Rr678	regulatory region 678	1917 bp proximal