rs6185537 SNP Detail

Summary

• ID
  rs6185537
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153780067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCACCTGA AGGCCTGGGA
  TCTCCAGGAA CATAGCCAGG TCAGGGCGAT AAAGCCCAGC TCATGTGACA CCATCCGGAG
  CTGAACACAC TTCTTGGAAT TAGCCACAAA CCACAAACTC TTGTGGTTTT GGGGCTCAGT
  GCTCAAGTTG TAGAGAAAAT CTGAATTCCG GTCTTATAAT TCTAGTCAGT CATAATTACC
  Y
  GGCCCTTCCC AGTCCGGGTC CCCACTCAGA CTGTGGCCAC TTTATAAAGC TGATCTGTGA
  CCAGACTCAG CCCACAGCAG AGGCCTGGGC AACAGACCTC TGAGGATTCA CTTGCACACC
  CCCTCAAGGG TAAGGAGGAG TCCCATCCCT GTCACAGGCC CAGGCTGGTA GGGGAGGCTG
  AGAAATGAGA AACCCCACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8591122	WI_WGS_2_154735610	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6185537					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153780067 () rs orientation: forward

Symbol	Name	Function Class
Bpifb4	BPI fold containing family B, member 4	70 bp upstream
Tssr20927	transcription start site region 20927	71 bp upstream