rs6185942 SNP Detail

Summary

• ID
  rs6185942
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57561763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTAAATAA TAACAGTACC
  TATACACATG GGCTGGAGAG ATGGCTTAGC AGCTAGATTT GCAGCTTTTC CAGAAGACGT
  GAGTTCGAGT CCTAGCACCT GTGTCAGGTG GCTCGTAACT GACTGCAACT TCAGCTCTAG
  GAGATTTAGC ACTCTTTTCT GGCCTCTAAA AGCAGTTGCT CACATATGAC ATATACATAT
  R
  CACACACAAA TAAAAATAAG TCTTCTCTTA AAAAAATAAT GATACCTACA TGAAAGACTA
  TGAGAAGTCT TAACTATGTA GTGCCTAGTC TGTTGCTTTT GGGTCAAACA GGCACAATAA
  GTGTTTGTTG TTACCGTTGT TAACTCATAA TGAAAGCAAT TAAATTAGAA AAACAATAAA
  ACTTTCATTA TTTTTCTATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8591527	WI_WGS_8_56254117	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6185942					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57561763 () rs orientation: forward

Symbol	Name	Function Class
Rr678	regulatory region 678	1878 bp proximal