rs6186268 SNP Detail

Summary

• ID
  rs6186268
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76393900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGACTAT CTCAAAAACT
  TACAAACAAA ACAATGAAGC TACTACTTCA GGTTGGTGTG GTATCTGTGT GTGTGCTGTT
  TTGTTTGTTT GAGACAGGGT CTAACTATGT CACTCTAACT GGTCTGGAAC TCACTATATA
  AACCAGGCTG GCCTTGAACT CAGAGATCAG CCTCACAAAT TCTGGGATTA GAGTCCATGC
  Y
  ACCATCTCTG GAACTCTGTC ATGTAACCTA ACTCACCATT CATCCAGAGG GGGATGGGGG
  TGGGGGAATA AAAACAATCG GTTTTTTTTT TTTTTTTTTT TTTTTGGTTT TATGAGACAG
  GATTTCTCTG TGTAGCCCTG GCTGTCCTGG AACTCACTTT GTAGACCAGG CTGGCCTCAA
  ACTCAGAAAT CCACCTGCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8591857	WI_WGS_12_71020236	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6186268					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76393900 () rs orientation: forward

Symbol	Name	Function Class
A430103D13Rik	RIKEN cDNA A430103D13 gene	1745 bp upstream
Rr257470	regulatory region 257470	1900 bp distal
Rr257471	regulatory region 257471	900 bp distal
Rr264230	regulatory region 264230	846 bp distal
Zbtb25	zinc finger and BTB domain containing 25	656 bp downstream