rs6186545 SNP Detail

Summary

• ID
  rs6186545
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57561902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGATTTAG CACTCTTTTC
  TGGCCTCTAA AAGCAGTTGC TCACATATGA CATATACATA TGCACACACA AATAAAAATA
  AGTCTTCTCT TAAAAAAATA ATGATACCTA CATGAAAGAC TATGAGAAGT CTTAACTATG
  TAGTGCCTAG TCTGTTGCTT TTGGGTCAAA CAGGCACAAT AAGTGTTTGT TGTTACCGTT
  R
  TTAACTCATA ATGAAAGCAA TTAAATTAGA AAAACAATAA AACTTTCATT ATTTTTCTAT
  ACTTTTACCT TTTATTGAAA ATAGATTTTA TTCTTGCATA ATACAACCCG ATTTCAGTCC
  CCAGTTCCTC CCCACTTCCG CTCCTATTAG ATCCACTCCT TTTCCACCTT TCATTTAAAA
  CAAACATGCT TCTAAGGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8592135	WI_WGS_8_56254256	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6186545					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57561902 () rs orientation: forward

Symbol	Name	Function Class
Rr678	regulatory region 678	1739 bp proximal
Rr663682	regulatory region 663682	1872 bp proximal