rs6186619 SNP Detail

Summary

• ID
  rs6186619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57561945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATGACAT ATACATATGC
  ACACACAAAT AAAAATAAGT CTTCTCTTAA AAAAATAATG ATACCTACAT GAAAGACTAT
  GAGAAGTCTT AACTATGTAG TGCCTAGTCT GTTGCTTTTG GGTCAAACAG GCACAATAAG
  TGTTTGTTGT TACCGTTGTT AACTCATAAT GAAAGCAATT AAATTAGAAA AACAATAAAA
  Y
  TTTCATTATT TTTCTATACT TTTACCTTTT ATTGAAAATA GATTTTATTC TTGCATAATA
  CAACCCGATT TCAGTCCCCA GTTCCTCCCC ACTTCCGCTC CTATTAGATC CACTCCTTTT
  CCACCTTTCA TTTAAAACAA ACATGCTTCT AAGGAACAAT ACTATAATAT AATAAAACAG
  AAATTAACAG GTCAGAACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8592209	WI_WGS_8_56254299	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6186619					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57561945 () rs orientation: forward

Symbol	Name	Function Class
Rr678	regulatory region 678	1696 bp proximal
Rr663682	regulatory region 663682	1829 bp proximal