rs6186883 SNP Detail

Summary

• ID
  rs6186883
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76394008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TGGTATCTGT
  GTGTGTGCTG Ttttgtttgt ttgagacagg gtctaactat gtcactctaa ctggtctgga
  actcactata taaaccaggc tggccttgaa ctcagagatc agcctcacaa attctgggat
  tagagtccat gcnaccatct ctgGAACTCT GTCATGTAAC CTAACTCACC ATTCANCCAG
  AGGGGGATGG GGGTGGGGGA ATAAAAACAA TCGGTTTTTT TTTTTTtttt ttttttttgg
  K
  tttatgagac aggatttctc tgtgtagccc tggctgtcct ggaactcact ttgtagacca
  ggctgncctc aaactcagaa atccacctgc ctctgcctcc caagcgctgg gattaaggcg
  tgtgccacca cgcccngGGG CAGGAGAACC TCTTAAATGT CTTCAGAGGT ATGGGAGTGG
  GGTCAGAATT AACTGGCTAT ACACACCGAG GTGTCTGTGA GATGGCACAT ACCCCATGGT
  GTGAGATGGC                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8592474	WI_WGS_12_71020344	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6186883					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76394008 () rs orientation: forward

Symbol	Name	Function Class
A430103D13Rik	RIKEN cDNA A430103D13 gene	1853 bp upstream
Rr257471	regulatory region 257471	1008 bp distal
Rr264230	regulatory region 264230	954 bp distal
Zbtb25	zinc finger and BTB domain containing 25	548 bp downstream