rs6187403 SNP Detail

Summary

• ID
  rs6187403
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76394074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAATTCTG GGATTAGAGT
  CCATGCCACC ATCTCTGGAA CTCTGTCATG TAACCTAACT CACCATTCAT CCAGAGGGGG
  ATGGGGGTGG GGGAATAAAA ACAATCGGTT TTTTTTTTTT TTTTTTTTTT TTGGTTTTAT
  GAGACAGGAT TTCTCTGTGT AGCCCTGGCT GTCCTGGAAC TCACTTTGTA GACCAGGCTG
  R
  CCTCAAACTC AGAAATCCAC CTGCCTCTGC CTCCCAAGCG CTGGGATTAA GGCGTGTGCC
  ACCACGCCCG GGGGCAGGAG AACCTCTTAA ATGTCTTCAG AGGTATGGGA GTGGGGTCAG
  AATTAACTGG CTATACACAC CGAGGTGTCT GTGAGATGGC ACATACCCCA TGGTGTGAGA
  TGGCATATAC CCCATGGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8592995	WI_WGS_12_71020410	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6187403					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76394074 () rs orientation: forward

Symbol	Name	Function Class
A430103D13Rik	RIKEN cDNA A430103D13 gene	1919 bp upstream
Rr257471	regulatory region 257471	1074 bp distal
Rr264230	regulatory region 264230	1020 bp distal
Zbtb25	zinc finger and BTB domain containing 25	482 bp downstream