rs6193755 SNP Detail

Summary

• ID
  rs6193755
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:62011166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCCTTAG GACCCAGATT
  GGCATGTATT GAAGGCATAC TTTGTGCAGA TGGAGACTGG TAGTCTGTCC TCAGAGCAGC
  AGCCTAACCA GTGTGTGGCT CAGCATGAAG ACATGTGAGT CAGTTTCCTC CCTAGCATTG
  AGCCAGTGAG AATCCACACC CAGACCTCTG CCTGCCACCC TAATGCAGCT CTTGTTTACA
  Y
  AGGCCAGAGG TGCCCCTTCT CATGGGTCTG CCAATCCCCA AATACGGCCA CAGCCAGAAA
  GTGAGAGGGT GCCCCTTATA TAAGGCTCTG TGTGCTGGTC CCCAGACAAT GCCGTTTCCT
  CGCCTGGCCA TGTGTGACTG CATAACACCC CTTGACTCAT TTCCTCTGGA AAACTCGGCA
  GGGCCACTTT GCCCTGCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss8599375	WI_WGS_15_62583908	WI	MOUSE	f	SNP					T		C
ss48004632	NES12068325	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T		C		C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs6193755					SNP	T	T	T	T	T	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48004632	NES12068325	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:62011166 () rs orientation: forward

Symbol	Name	Function Class
Pvt1	Pvt1 oncogene	within coordinates
Rr303301	regulatory region 303301	1766 bp distal
Rr313892	regulatory region 313892	within coordinates