rs6195319 SNP Detail

Summary

• ID
  rs6195319
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46874527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         tttatggata
  ttggtgtttg gcctgaatgt atatgtatct gtgcctaata cctgaaggaa gaagagagca
  gggtctaata ctctggaacc ggagttaggg aaggttgtga gctgccacgt gggtgctgtg
  aattgaacct gggtcctctg caagagctac aaagtgcgga cctttttttt tttttaaaga
  tgtatttgtt tatcatatgt aagtacagtg tagctgtctt cagacgctcc agaagagggc
  R
  tcagatctca ttacagatgg ttgtgagcca ccatgtggtt gctgggattt gaactcaaga
  cctttggaag agcagtcagc actcttatcc gctgagccat ctcgccagcc ccaaagaagg
  gatcttaacc aatgagacat tacccagctc ATCTTGGGTG GGTGGAGGGt tcaagacagg
  atttctctgt ctgacaggcc tagctgtcca aaacagctct gtagagcaga cccactgcta
  actcaGATCT                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8600944	WI_WGS_17_45583103	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6195319					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46874527 () rs orientation: forward

Symbol	Name	Function Class
Gm65094	predicted gene, 65094	1000 bp downstream
Ptk7	PTK7 protein tyrosine kinase 7	870 bp downstream