rs6196024 SNP Detail

Summary

• ID
  rs6196024
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:108133385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         aaccacatgg
  tggctcacaa ccatccggaa tgaaatctga ctccctcttc tggagtgtct gaagacagct
  acagtgtact tacatataat aaaaataaat aaatctttaa aaaaaaaaaa aaAAAAAAAA
  GCATGTGCCT ACTCATGGCT CCAACTGAGC TCTTTATGTT TTTTTCTTGT TTCCTTGTTT
  TTATATTTAT TTGGGAAGAG AACAccacag tgtatgtggc agccaaagga caacttatgg
  R
  anccaattct ttccttctcc caagtgagtt gtggggatga cctcaggttg tcaggttgat
  gacaagtgcc ttacttgctg agccatctca tgggTTTTTT TCAGTTATAC ATTNTTATTA
  TTTAGAATAT TGTTACGCTA ATTTTTTCTT ACAGTATTGA TTCTGTCCAA GCTGGAAATG
  TAGCTGCTTG CTGACTGCTT GTTGAACATG TATAAACTCC AGGATTTGAT CTTATCAACT
  GAGTGTGGTG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8601651	WI_WGS_9_109122891	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6196024					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:108133385 () rs orientation: forward

Symbol	Name	Function Class
Dag1	dystroglycan 1	within coordinates