rs6198984 SNP Detail

Summary

• ID
  rs6198984
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35126105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAGGCTT CCAAGGGCCC
  ACTAAAGGTC ATCCTGGGCT ACACTGAGGA CTCAGGGCCA CTGATCTCCC TCACAATTTT
  CATCCCAGAC CCCCCATAAT AACAGGAGGG CTTAGGGAGC CCTCTCTACT TTCTTGAATA
  CCATCAATAA AAGTTCACTG TACCCACCAA AAAGAAAAAA ATCTCCAAGG ACCAAACCTC
  R
  AAGAAATGCA CCTGAAACCA TGGAGTAGAA GCCATAAAAA AAATCCACGT CAGAAGACAG
  GAAAATATCT TATTTTTTTG TGAACAGTGT TATAATGCAC ACAGGATTAG AACTATAAAA
  TCTATATATA GAGAGATAAC TGATTTCATT TCTTTTGGAT AAATGCCCAC AAGTGAGATT
  GCTGGATCGT ATAATTCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8604618	WI_WGS_13_34312042	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6198984					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35126105 () rs orientation: forward

Symbol	Name	Function Class
Gm8245	predicted gene 8245	493 bp downstream
Tex56	testis expressed 56	within coordinates