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rs6204775 SNP Detail
Summary
  • ID
    rs6204775
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr12:73420174 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GACATGAGGC CCCCCCAACA
    CACATGCAGT CGAGTACTTC TGGGTCTGTA TTCATTCAGA AATGACGCAC CTAACTCTCA
    AGAGACTGGA GGTCCCAGGG AATTTAGAGG TCAGAGAGGT TGAAGGGTGG GGACATCCAC
    GAGGAGACAG AGGGGTAGGG AGGAGGTATG GGATGTGGAA CAGTCAAAGG GTGGTGGTGG
    K
    GGGGATGGAA TAAAATATGG AGTGTAAAAA AATAAAAAAC AATAAATAAA TAAATAAACA
    AGTGAGGATA TATATAACAT ATAATGTAAA GTTAGGTTCT GATGAACAAA AGGCATATAT
    TCTAATATGC CAGGGAAACC ACACAAAAGA GCTTAGATAC AAATCACATA GTGGTGATGA
    AAGTTAATCA GAAGAGATGC                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
C57BL/6J
CZECHII/EiJ
ss8610422 WI_WGS_12_68025291 WI MOUSE f SNP G T
SNP Consensus Information
SNP Consensus Type
C57BL/6J
CZECHII/EiJ
rs6204775 SNP G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:73420174 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
D830013O20Rik RIKEN cDNA D830013O20 gene within coordinates
Rr257323 regulatory region 257323 1227 bp proximal
Rr264129 regulatory region 264129 1675 bp distal
Rr264130 regulatory region 264130 1248 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory