rs6205231 SNP Detail

Summary

• ID
  rs6205231
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73420217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGTATTC ATTCAGAAAT
  GACGCACCTA ACTCTCAAGA GACTGGAGGT CCCAGGGAAT TTAGAGGTCA GAGAGGTTGA
  AGGGTGGGGA CATCCACGAG GAGACAGAGG GGTAGGGAGG AGGTATGGGA TGTGGAACAG
  TCAAAGGGTG GTGGTGGGGG GGATGGAATA AAATATGGAG TGTAAAAAAA TAAAAAACAA
  W
  AAATAAATAA ATAAACAAGT GAGGATATAT ATAACATATA ATGTAAAGTT AGGTTCTGAT
  GAACAAAAGG CATATATTCT AATATGCCAG GGAAACCACA CAAAAGAGCT TAGATACAAA
  TCACATAGTG GTGATGAAAG TTAATCAGAA GAGATGCTTA GCCCAAGAGA AAGCAGGAAT
  GTAGATGGAT CAGCAGCAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8610879	WI_WGS_12_68025334	WI	MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6205231					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73420217 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	1184 bp proximal
Rr264129	regulatory region 264129	1718 bp distal
Rr264130	regulatory region 264130	1205 bp proximal