rs6205558 SNP Detail

Summary

• ID
  rs6205558
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40246389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTTTTGG TTTTTATTTT
  TTTAAATGTG TGTGTGCTCA TATACATGTG TGTGTATGTG CCACAGGCAT GTATATTGGT
  CAGAAGACAA CTTGCAGGAT TCAGGGATTA AACTCAGGTT AGAAAGGTTT GGTGACAGAG
  GACATTGTTG CTGTCTTCAG AGACACCAGA AGAGGGCATC AGATCCCATT ACAGATAGTT
  S
  TGAGTCACCA TGTGGTTGTT GGGAATTGAA CCCAGGACCT CTGGAAGAGC AGTCAGTGCT
  CTTAACTGCT GAGCCATCTC TCAAGCCTGA CAAAGAGCTT TTATGTGCTC ATCTTACTGG
  CCTCTTTTTT TCTTTTAGGA TTAGAAAATG TGTGCAGGCT GGACGGTGGT GGCACACTCC
  TTTAATCTCA GCACTCTGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss8611206	WI_WGS_10_40409776	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs6205558					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40246389 () rs orientation: forward

Symbol	Name	Function Class
Cdk19	cyclin dependent kinase 19	within coordinates
Rr384549	regulatory region 384549	869 bp upstream