rs6206786 SNP Detail

Summary

• ID
  rs6206786
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83298243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAGGCTA GACAGATCAA
  AGGACCAAAC CCTTTGAACT TTCCCAGCAA GGTTATTTCT AGTGACAGAG AATGAACAGG
  CCCAAGTCAG CTCTCAGCAA AGCAAAATGA GTTAACTTCG GGCAAATGTA CCATTTTATA
  AAGTACTACT TTATAGCAGT GCTTTAAATG ACATACCACT GACGGCTAGT ATGAGGTTTC
  R
  TCATCTGTAG GGGACAGCCT TGCTAGGTTT CTTATTTCTA GTCCCCCTCA AGCTGAAATG
  GACCTATGTC CTGAGGGAAG AACAGAAAGC CTGTATCCTC AGGCAAGATG AGGATGAAAG
  TTTTTTGAAC GCAGTAGGAA AGAGTGTCCT GGATGATTTA ACCAAGCTAA GAGGGTGTCA
  GTGGCTCCTC TGGAATCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8612436	WI_WGS_11_84058166	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6206786					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83298243 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3411	CpG island 3411	1706 bp proximal
Gm72478	predicted gene, 72478	443 bp downstream
Rasl10b	RAS-like, family 10, member B	1720 bp upstream
Rr452947	regulatory region 452947	1630 bp proximal
Rr452948	regulatory region 452948	1781 bp proximal
Tssr103692	transcription start site region 103692	1799 bp upstream