rs6206814 SNP Detail

Summary

• ID
  rs6206814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83298262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGACCAAA CCCTTTGAAC
  TTTCCCAGCA AGGTTATTTC TAGTGACAGA GAATGAACAG GCCCAAGTCA GCTCTCAGCA
  AAGCAAAATG AGTTAACTTC GGGCAAATGT ACCATTTTAT AAAGTACTAC TTTATAGCAG
  TGCTTTAAAT GACATACCAC TGACGGCTAG TATGAGGTTT CGTCATCTGT AGGGGACAGC
  Y
  TTGCTAGGTT TCTTATTTCT AGTCCCCCTC AAGCTGAAAT GGACCTATGT CCTGAGGGAA
  GAACAGAAAG CCTGTATCCT CAGGCAAGAT GAGGATGAAA GTTTTTTGAA CGCAGTAGGA
  AAGAGTGTCC TGGATGATTT AACCAAGCTA AGAGGGTGTC AGTGGCTCCT CTGGAATCTC
  TCGAGTCCAG TCATATCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8612464	WI_WGS_11_84058185	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6206814					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83298262 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3411	CpG island 3411	1687 bp proximal
Gm72478	predicted gene, 72478	424 bp downstream
Rasl10b	RAS-like, family 10, member B	1701 bp upstream
Rr452947	regulatory region 452947	1611 bp proximal
Rr452948	regulatory region 452948	1762 bp proximal
Tssr103692	transcription start site region 103692	1780 bp upstream