rs6207953 SNP Detail

Summary

• ID
  rs6207953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:149508038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTGACTA CCATTATTAT
  TAACAGTTAT CAGTGTTCTG CTTATCAGTT ATCCTCTTGA CCAAGTCAGG ATGAAGATGA
  AGGCTGTCTG TCTCCATGTG CAGATCACTA GGCTCACAAT ATTAAATTAA TTTGCTTGGG
  GCTTCAAGGG TAAGGTTGTT TTTATTGCTT TTGTTGTTGA GGTTTTGTTT GTTTTGTTAT
  Y
  GCTGCTACTG CCATGTTGTT GTTGTTGTTG TTGTTGTTGT TGTTGTTGTT GTTGTTGTTT
  TAGAATAAGA TGTATTACTG TCTCTGGATC ACCACGGAAA GCATACAGGT AGCATTGGAT
  CTTGTTTCTG AGTTCTGTGA ATACCCTGTG GTTGCAAGAA ATGCTTTCCC TGTCCTGGCT
  AAGAGGATGT TTCCTTTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8613605	WI_WGS_2_150699850	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6207953					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:149508038 () rs orientation: forward

Symbol	Name	Function Class
Gm53264	predicted gene, 53264	within coordinates
Rr566994	regulatory region 566994	335 bp proximal