rs6209767 SNP Detail

Summary

• ID
  rs6209767
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:50090887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TGAGGTCTGA
  ATTGNGGCAG CCTCAGGAGC GAGGAAGTGT GCACAGCGTG AAAATATGAG TTTTGANGTT
  CATATATTTC TTTCTTTTTT TTTAAAAAAA CATTTTTCGT TGAATTTTTT AAtttttaat
  atntttttat tacgtatttt cctcaattac atttccaatg ctatcccaaa agtcccgcat
  acccttcccc ccacttccct acccacccat tcccattttt tttggccctt gcgttcccct
  R
  tactggggca tataaagttt gcaagtccaa tgggcctctc ttttcagtga tggnngacta
  ggccatcttt tgatacatat gcagctagag tcaagagctc canggtactg gttagttcat
  aatgttgttc cacctatagg gttgcagatc cctttagctc cttggntact ttctctagct
  cctccattgg gagccctgtg atccatccan tagctgactg tgagaatcca cttctgtgtt
  tgctagaccc                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8615428	WI_WGS_13_49586819	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6209767					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:50090887 () rs orientation: forward

Symbol	Name	Function Class
Rr388407	regulatory region 388407	1664 bp upstream